Multiple sequence alignment

Results: 312



#Item
81

Multiple Sequence Alignment Using a Genetic Algorithm Masamichi Isokawa Masato Wayama Toshio Shimizu

Add to Reading List

Source URL: www.jsbi.org

Language: English - Date: 1998-01-09 02:50:25
    82Statistics / Computational statistics / Data analysis / Cluster analysis / Data mining / Geostatistics / Hierarchical clustering / Single-linkage clustering / K-means clustering / Silhouette / Multiple sequence alignment / K-medoids

    Genome Informatics 16(1): 3–Evaluating Distance Functions for Clustering Tandem Repeats

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 2005-12-28 10:55:27
    83Biology / Genetics / Computational phylogenetics / Bioinformatics / Molecular biology / Nucleic acids / RNA / Multiple sequence alignment / Sequence alignment / Nucleic acid sequence / Transfer RNA / RNA-Seq

    Multiple RNA-Sequence Alignment Considering Stem Regions 1 M. Ishikawa1

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 1998-01-09 02:49:53
    84Biology / Bioinformatics / DNA binding site / Position weight matrix / Multiple sequence alignment / Chromatin immunoprecipitation / Transcription factor / Sequence motif / DNA-binding protein / ChIP-on-chip / Cis-regulatory element / Promoter

    Genome Informatics 16(1): 59–Assessing Transcription Factor Motif Drift from Noisy Decoy Sequences

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 2005-12-28 10:55:29
    85Bioinformatics / Operations research / Computational phylogenetics / Protein structure / Mathematical optimization / Multiple sequence alignment / Dynamic programming / Docking / Linear programming / Algorithm

    114 Genome Informatics 16(2): 114–Comparison of Protein Structures by Multi-Objective Optimization

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 2005-12-28 06:18:58
    86Bioinformatics / Biology / Mathematical and theoretical biology / Sequence motif / Structural biology / PROSITE / Consensus sequence / Multiple sequence alignment / Sequence alignment

    Detecting common amino acid sequence patterns with a gap Mikita Suyama Takaaki Nishioka

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 1998-01-09 02:50:02
    87Bioinformatics / Biology / Proteinprotein interaction / Sequence alignment / Multiple sequence alignment / Protein / Proteinprotein interaction prediction / Interactome

    496 Genome Informatics 14: 496–Prediction of Protein-Protein Interactions from Phylogenetic Trees Using Partial Correlation Coefficient

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 2003-12-11 04:13:42
    88Computational phylogenetics / Bioinformatics / Dynamic programming / Biology / Applied mathematics / Sequence alignment / SmithWaterman algorithm / Algorithm / Multiple sequence alignment / FASTA

    Design of a Hardware Board for Sequence Alignment T. Kato 1 M. Taiji 2

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 1998-01-09 02:50:17
    89Computational phylogenetics / Mathematics / Bioinformatics / Applied mathematics / Mathematical optimization / Operations research / Systems science / Markov models / Dynamic programming / Multiple sequence alignment / Sequence alignment / Minimum spanning tree

    Genome Informatics 16(2): 237–A Space-Efficient Algorithm for the Constrained Pairwise Sequence Alignment Problem

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 2005-12-28 06:18:56
    90Computational phylogenetics / Bioinformatics / Biology / Applied mathematics / Multiple sequence alignment / Sequence alignment / NeedlemanWunsch algorithm / SmithWaterman algorithm / Phylo / Substitution matrix / Dynamic programming / Similarity measure

    Multiple sequence alignment using anchor points through generalized dynamic programming J. Gracy J. Sallantin

    Add to Reading List

    Source URL: www.jsbi.org

    Language: English - Date: 1998-01-09 02:49:53
    UPDATE